1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g056680

Adi_g056680


Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00132920 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00090p00165440 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G27940 PGP13 P-glycoprotein 13 0.03 OrthoFinder output from all 47 species
AT4G25960 PGP2 P-glycoprotein 2 0.02 OrthoFinder output from all 47 species
AT5G46540 PGP7 P-glycoprotein 7 0.03 OrthoFinder output from all 47 species
Adi_g029160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044596 PGP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080508 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07132 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21203 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37349 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42791.t1 PGP21, Aspi01Gene42791 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012029 ABCB19,... subfamily ABCB transporter & original description: CDS=121-4035 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.03 OrthoFinder output from all 47 species
Azfi_s2496.g111845 ABCB19,... subfamily ABCB transporter & original description: CDS=142-3066 0.02 OrthoFinder output from all 47 species
Ceric.07G010800.1 PGP11, Ceric.07G010800 subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000025.2 No alias No description available 0.03 OrthoFinder output from all 47 species
Dde_g28161 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41259 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015306001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_02469 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g17180.1 PGP20, LOC_Os03g17180 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Lfl_g16192 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_138894g0010 PGP11 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp7g16060.1 PGP11 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Nbi_g02494 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60650 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16181 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002681 ABCB19,... regulatory protein *(HY5) of UV-B signal transduction &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022862 No alias not classified & original description: CDS=281-511 0.03 OrthoFinder output from all 47 species
Smo84555 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc02g087410.4.1 Solyc02g087410 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc03g093650.3.1 Solyc03g093650 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e014797_P002 Zm00001e014797 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1063 1210
IPR011527 ABC1_TM_dom 85 358
IPR011527 ABC1_TM_dom 722 991
IPR003439 ABC_transporter-like_ATP-bd 426 575
No external refs found!