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  5. Adi_g058884

Adi_g058884 (ATTRB1, TRB1)


Aliases : ATTRB1, TRB1

Description : not classified & original description: none


Gene families : OG0000994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g058884

Target Alias Description ECC score Gene Family Method Actions
Als_g21441 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
Aop_g06702 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
Aop_g13254 ATTRB1, TRB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010067 ATTRB1, TRB1 not classified & original description: CDS=853-1392 0.03 OrthoFinder output from all 47 species
Cba_g12893 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
Ehy_g17070 ATTRB1, TRB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36211 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
MA_49770g0010 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Mp3g05000.1 ATTRB1, TRB1 PRC2-recruiting factor (TRB). transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Ore_g11264 ATTRB1, TRB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01262 ATTRB1, TRB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08695 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.03 OrthoFinder output from all 47 species
Sam_g27570 No alias PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.03 OrthoFinder output from all 47 species
Sam_g39657 No alias PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
Zm00001e016829_P002 ATTRB1, TRB1,... PRC2-recruiting factor (TRB). transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e020011_P001 Zm00001e020011 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 5 56
IPR005818 Histone_H1/H5_H15 119 177
No external refs found!