Aliases : ATVPS54, VPS54
Description : GARP-specific component *(VPS54) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes & original description: none
Gene families : OG0004672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004672_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00072p00168660 | ATVPS54, VPS54,... | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G19490 | ATVPS54, VPS54 | VPS54 | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02680 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g05127 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08788 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G033300.1 | ATVPS54, VPS54,... | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000241.25 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre02.g087551 | ATVPS54, VPS54 | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12433 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037972001 | ATVPS54, VPS54 | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_03763 | ATVPS54, VPS54 | GARP-specific component VPS54 of GARP/EARP... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g13470.1 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g02410 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g09490.1 | ATVPS54, VPS54 | GARP-specific component VPS54 of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g13080.1 | ATVPS54, VPS54 | GARP-specific component VPS54 of GARP/EARP... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g23962 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16046 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15136 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01065 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03262 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10508 | No alias | GARP-specific component *(VPS54) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g030100.4.1 | ATVPS54, VPS54,... | Vacuolar protein sorting-associated protein 54,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g030110.2.1 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e008702_P001 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e040599_P001 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
