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  5. Adi_g064547

Adi_g064547


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g064547

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00174110 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G58470 RBP1, ATRBP1 RNA-binding protein 1 0.03 OrthoFinder output from all 47 species
AT2G33410 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Ala_g08655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.27 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre07.g330300 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre12.g560300 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g01661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_17440V3.1 Pp3c4_17440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Ppi_g06905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002214 No alias not classified & original description: CDS=892-2337 0.02 OrthoFinder output from all 47 species
Zm00001e032753_P002 Zm00001e032753 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 61 119
No external refs found!