Description : endomembrane trafficking ATG6-stability regulator protein *(TRAF1) & original description: none
Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dcu_g03193 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018133001 | No alias | Vesicle trafficking.endomembrane trafficking.PI3-kinase... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g43280.1 | LOC_Os05g43280 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10345 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10347 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g14880.1 | No alias | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36306 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08395 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g089560.4.1 | Solyc09g089560 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05754 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003140_P001 | Zm00001e003140 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032087_P004 | Zm00001e032087 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | HCCA |
| CC | GO:0000178 | exosome (RNase complex) | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| CC | GO:1905354 | exoribonuclease complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
