Aliases : HSS, ARF1-BP, ARF2, ORE14
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00200760 | ARF4,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00036p00215020 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT1G35240 | ARF20 | auxin response factor 20 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G20730 | TIR5, MSG1,... | Transcriptional factor B3 family protein /... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22072 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0099.g044147 | ARF16 | ARF-type transcription factor & original description: CDS=1-2757 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g78264 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G078200.1 | ARF6, Ceric.10G078200 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G060100.1 | ARF1, Ceric.18G060100 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G056500.1 | ARF16, Ceric.32G056500 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12286 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019566001 | ARF9 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021128001 | ARF3, ETT | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021553001 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035204001 | ARF8, ATARF8 | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037136001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| MA_55076g0010 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Smo115320 | ARF6 | Auxin response factor 25 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g29254 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003591_P003 | ARF19, IAA22,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| No external refs found! |
