Aliases : AFB2
Description : not classified & original description: none
Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G26810 | AFB2 | auxin signaling F-box 2 | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02094 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g01939 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g00736 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13912 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene40792.t1 | COI1, Aspi01Gene40792 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07454 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22715 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G036600.1 | COI1, Ceric.05G036600 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G069600.1 | COI1, Ceric.11G069600 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G039600.1 | AFB2, Ceric.16G039600 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16295 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023363001 | No alias | Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07237 | COI1 | Coronatine-insensitive protein homolog 1b OS=Oryza... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_30742 | TIR1 | Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g37690.1 | COI1, LOC_Os05g37690 | component COI of jasmonic acid receptor complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g31620.1 | AFB2, LOC_Os11g31620 | component TIR1/AFB of auxin receptor complex. component... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g15985 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19165 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| MA_78902g0010 | AFB5 | component TIR1/AFB of auxin receptor complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g26590.1 | COI1 | component COI of jasmonic acid receptor complex | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01206 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04893 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15041 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06047 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023831_P001 | Zm00001e023831 | component TIR1/AFB of auxin receptor complex. component... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026935_P001 | COI1, Zm00001e026935 | component COI of jasmonic acid receptor complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0004743 | pyruvate kinase activity | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0030955 | potassium ion binding | IEP | HCCA |
| MF | GO:0031420 | alkali metal ion binding | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR041567 | COI1_F-box | 56 | 95 |
| No external refs found! |
