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  5. Adi_g078542

Adi_g078542


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g078542

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00097640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
Adi_g005601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10387 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16630 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07268 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28460 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19340 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26948 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04252 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09925.t1 Aspi01Gene09925 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50511.t1 Aspi01Gene50511 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68197.t1 Aspi01Gene68197 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008361 CRR22 not classified & original description: CDS=1-1914 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009910 EMB2758 not classified & original description: CDS=1-1803 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023799 No alias not classified & original description: CDS=1-1911 0.02 OrthoFinder output from all 47 species
Azfi_s0050.g031009 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2424 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037414 No alias not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037545 No alias not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Azfi_s0101.g044355 No alias not classified & original description: CDS=1-2031 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048736 No alias not classified & original description: CDS=1-3153 0.03 OrthoFinder output from all 47 species
Cba_g05246 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07299 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24553 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67693 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G037300.1 Ceric.28G037300 not classified & original description: pacid=50570602... 0.03 OrthoFinder output from all 47 species
Dac_g09912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08223 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08653 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16864 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45918 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46554 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.04 OrthoFinder output from all 47 species
Gb_21443 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
LOC_Os08g39130.1 LOC_Os08g39130 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_10430355g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_10436932g0010 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_193080g0010 CRR22 Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_9384g0020 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
MA_953793g0020 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g12985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21793 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28345 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45078 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22860 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22233 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53962 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014790 No alias not classified & original description: CDS=1-2049 0.02 OrthoFinder output from all 47 species
Sam_g17157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo93439 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Solyc09g015370.1.1 Solyc09g015370 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17148 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008193 tRNA guanylyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 52 74
IPR002885 Pentatricopeptide_repeat 558 581
IPR002885 Pentatricopeptide_repeat 454 482
IPR002885 Pentatricopeptide_repeat 284 312
IPR002885 Pentatricopeptide_repeat 154 178
IPR002885 Pentatricopeptide_repeat 254 276
IPR002885 Pentatricopeptide_repeat 76 125
IPR002885 Pentatricopeptide_repeat 382 429
IPR002885 Pentatricopeptide_repeat 484 530
No external refs found!