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  5. Adi_g078586

Adi_g078586


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g078586

Target Alias Description ECC score Gene Family Method Actions
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g042910 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10286.t1 Aspi01Gene10286 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36735.t1 Aspi01Gene36735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55840.t1 Aspi01Gene55840 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56965.t1 Aspi01Gene56965 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07105 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36050 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36053 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01025569001 No alias Pentatricopeptide repeat-containing protein At5g66500,... 0.02 OrthoFinder output from all 47 species
GSVIVT01028022001 No alias Pentatricopeptide repeat-containing protein At3g62890... 0.02 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.02 OrthoFinder output from all 47 species
Len_g02917 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03890 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54667 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47301 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026755 CRR22 not classified & original description: CDS=1-2307 0.03 OrthoFinder output from all 47 species
Sam_g08419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo181046 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g005850.3.1 Solyc07g005850 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 12 34
IPR002885 Pentatricopeptide_repeat 48 73
IPR032867 DYW_dom 196 270
IPR046848 E_motif 93 151
No external refs found!