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  5. Ehy_g15720

Ehy_g15720


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g15720
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00188860 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g057517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g064547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06166.t1 Aspi01Gene06166 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15092.t1 Aspi01Gene15092 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41899.t1 Aspi01Gene41899 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0390.g067677 No alias not classified & original description: CDS=363-1799 0.03 OrthoFinder output from all 47 species
Ceric.23G034800.1 Ceric.23G034800 not classified & original description: pacid=50611547... 0.03 OrthoFinder output from all 47 species
Dac_g01661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g39560.3 LOC_Os07g39560 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pnu_g20248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002214 No alias not classified & original description: CDS=892-2337 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011007 No alias not classified & original description: CDS=1206-2705 0.03 OrthoFinder output from all 47 species
Sam_g10981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 73
IPR000504 RRM_dom 110 168
No external refs found!