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  5. Adi_g080212

Adi_g080212 (UBP23)


Aliases : UBP23

Description : deubiquitinase *(UBP23) & original description: none


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g080212

Target Alias Description ECC score Gene Family Method Actions
Als_g18505 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01298 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.67 UBP15 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Cre14.g629300 UBP23 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Dcu_g09670 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000696001 UBP15 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Lfl_g03280 UBP23 deubiquitinase *(UBP23) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429414g0020 UBP18 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Mp1g03220.1 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g05560.1 UBP18 deubiquitinase (UBP15-21) 0.01 OrthoFinder output from all 47 species
Mp3g16110.1 UBP23 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012965 UBP25 component *(bL25m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g09289 No alias deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Smo420048 UBP18 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Solyc02g005000.1.1 Solyc02g005000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g061780.4.1 UBP15, Solyc07g061780 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Zm00001e022516_P001 UBP17, Zm00001e022516 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 14 256
No external refs found!