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  5. Adi_g080261

Adi_g080261


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g080261

Target Alias Description ECC score Gene Family Method Actions
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07448 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07793 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26591 MEF21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26592 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30196 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42783 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70862 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0731.g084096 No alias not classified & original description: CDS=1-3909 0.04 OrthoFinder output from all 47 species
Cba_g06922 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19562 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g43653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G115200.1 Ceric.01G115200 not classified & original description: pacid=50591005... 0.04 OrthoFinder output from all 47 species
Ceric.02G034000.1 OTP84, Ceric.02G034000 not classified & original description: pacid=50585959... 0.03 OrthoFinder output from all 47 species
Ceric.10G028900.1 Ceric.10G028900 not classified & original description: pacid=50613320... 0.02 OrthoFinder output from all 47 species
Ceric.14G063300.1 Ceric.14G063300 not classified & original description: pacid=50633241... 0.02 OrthoFinder output from all 47 species
Ceric.28G069900.1 Ceric.28G069900 not classified & original description: pacid=50570610... 0.02 OrthoFinder output from all 47 species
Ceric.31G002400.1 Ceric.31G002400 not classified & original description: pacid=50574432... 0.02 OrthoFinder output from all 47 species
Dac_g09912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01038381001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.01 OrthoFinder output from all 47 species
LOC_Os08g39130.1 LOC_Os08g39130 Pentatricopeptide repeat-containing protein At2g29760,... 0.01 OrthoFinder output from all 47 species
LOC_Os12g15460.1 LOC_Os12g15460 Pentatricopeptide repeat-containing protein At1g18485... 0.01 OrthoFinder output from all 47 species
Len_g19027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21957 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47222 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15408 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18964 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19959 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13434 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66342 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013907 No alias not classified & original description: CDS=1-1875 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015358 No alias not classified & original description: CDS=223-2631 0.02 OrthoFinder output from all 47 species
Sam_g19551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo30095 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Spa_g18014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16966 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24942 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006282 regulation of DNA repair IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 280 326
IPR002885 Pentatricopeptide_repeat 481 529
IPR002885 Pentatricopeptide_repeat 182 225
IPR002885 Pentatricopeptide_repeat 78 125
IPR002885 Pentatricopeptide_repeat 355 379
IPR002885 Pentatricopeptide_repeat 383 409
IPR002885 Pentatricopeptide_repeat 254 274
No external refs found!