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  5. Adi_g087180

Adi_g087180


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g087180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
AMTR_s00122p00115170 CRR21 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
Adi_g005327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13877 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37112 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37979 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g43028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22090.t1 Aspi01Gene22090 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25992.t1 Aspi01Gene25992 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51368.t2 CRR22, Aspi01Gene51368 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64343.t1 Aspi01Gene64343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000887 No alias not classified & original description: CDS=1-1611 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001620 No alias not classified & original description: CDS=1-4653 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034605 No alias ssDNA-binding protein *(OSB) & original description: CDS=21-2777 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043216 CRR22 not classified & original description: CDS=139-1788 0.03 OrthoFinder output from all 47 species
Azfi_s0303.g063761 No alias not classified & original description: CDS=81-2876 0.03 OrthoFinder output from all 47 species
Azfi_s0349.g066478 OTP84 not classified & original description: CDS=1-2082 0.03 OrthoFinder output from all 47 species
Azfi_s1562.g104338 OTP84 not classified & original description: CDS=59-2905 0.03 OrthoFinder output from all 47 species
Cba_g07770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.03 OrthoFinder output from all 47 species
Ceric.18G049300.1 Ceric.18G049300 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.101 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g23056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38672 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05340 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033190001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.05 OrthoFinder output from all 47 species
LOC_Os03g55840.1 LOC_Os03g55840 Pentatricopeptide repeat-containing protein DWY1,... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05426 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55702 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06167 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39841 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40090 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_103380g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_10428421g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_109016g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_109016g0020 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_115669g0020 EMB2758 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_12023g0010 No alias RNA editing factor (MEF9) 0.02 OrthoFinder output from all 47 species
MA_25729g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
MA_43497g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_4438g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.02 OrthoFinder output from all 47 species
MA_72442g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_73205g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_733561g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g28512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06220 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09876 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40238 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45078 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13573 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04638 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32296 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52993 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000724 No alias not classified & original description: CDS=90-728 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011073 No alias not classified & original description: CDS=173-2326 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012842 CRR2 not classified & original description: CDS=114-1901 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026676 No alias not classified & original description: CDS=1-2475 0.03 OrthoFinder output from all 47 species
Sam_g12389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo110980 OTP82 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Smo111891 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
Smo70183 OTP84 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Smo85415 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Smo92471 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Spa_g06501 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 464 486
IPR002885 Pentatricopeptide_repeat 191 220
IPR002885 Pentatricopeptide_repeat 163 186
IPR002885 Pentatricopeptide_repeat 533 556
IPR002885 Pentatricopeptide_repeat 393 422
IPR002885 Pentatricopeptide_repeat 494 524
IPR002885 Pentatricopeptide_repeat 365 388
IPR002885 Pentatricopeptide_repeat 289 335
IPR002885 Pentatricopeptide_repeat 86 135
No external refs found!