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  5. Adi_g087476

Adi_g087476


Description : not classified & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g087476
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AT1G72860 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G72920 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 OrthoFinder output from all 47 species
AT1G72950 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
Adi_g033354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g045822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g049347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g050158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57960 TAO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60152.t1 Aspi01Gene60152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012762001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
Gb_25646 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_29198 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_10432427g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_402193g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_542770g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_8594057g0010 No alias Disease resistance-like protein DSC1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g42612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46310 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48708 No alias effector receptor *(NLR) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006450 regulation of translational fidelity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 195 336
IPR000157 TIR_dom 18 182
No external refs found!