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  5. Adi_g088971

Adi_g088971


Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g088971

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00195870 PGP1, ABCB1,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Adi_g007985 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09585 PGP10 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08446.t1 PGP11, Aspi01Gene08446 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08454.t1 PGP11, Aspi01Gene08454 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08455.t1 PGP11, Aspi01Gene08455 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene12320.t2 PGP2, Aspi01Gene12320 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15960.t1 Aspi01Gene15960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15961.t1 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32170.t1 ABCB14,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43896.t1 PGP6, Aspi01Gene43896 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene62048.t1 PGP2, Aspi01Gene62048 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene62054.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62055.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29451 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02953 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09264 PGP20 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28462 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08933 PGP11 ABC transporter B family member 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_13909 PGP2 ABC transporter B family member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g05690.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Nbi_g04453 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38555 ABCB19,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018197 ABCB19,... subfamily ABCB transporter & original description: CDS=226-4089 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019194 No alias not classified & original description: CDS=54-1700 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022862 No alias not classified & original description: CDS=281-511 0.03 OrthoFinder output from all 47 species
Zm00001e003866_P001 PGP1, ABCB1,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e025063_P001 Zm00001e025063 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 103 374
IPR011527 ABC1_TM_dom 753 1013
IPR003439 ABC_transporter-like_ATP-bd 1084 1232
IPR003439 ABC_transporter-like_ATP-bd 447 595
No external refs found!