1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g089158

Adi_g089158


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g089158
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00155620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00191560 OTP82,... Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
AMTR_s00081p00056740 OTP82,... Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17641 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36028 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0400.g068228 No alias not classified & original description: CDS=1-1902 0.02 OrthoFinder output from all 47 species
Azfi_s0583.g078513 No alias not classified & original description: CDS=1-2793 0.06 OrthoFinder output from all 47 species
Cba_g18613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42993 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01024606001 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.06 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18911 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54059 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07823 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429043g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_10432670g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_11765g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_124868g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_39263g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_408185g0010 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species
MA_60579g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
MA_724726g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_7379g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_812716g0010 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_904305g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_95261g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Nbi_g04943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38695 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g43002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05129 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33393 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63739 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05910 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46621 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008229 No alias not classified & original description: CDS=1-3597 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022894 No alias not classified & original description: CDS=1-2625 0.03 OrthoFinder output from all 47 species
Sam_g49034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100938 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Smo130525 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
Smo34785 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g06827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14323 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16206 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55537 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17315 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17584 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 8 37
No external refs found!