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  5. Ehy_g17111

Ehy_g17111


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17111
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AT2G21610 ATPE11, PE11 pectinesterase 11 0.02 OrthoFinder output from all 47 species
AT5G07420 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g19093 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16581 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16993 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20050 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24708 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07065 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11060 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47598 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04100 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14509 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16629 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21821 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14528 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g024992 No alias pectin methylesterase & original description: CDS=226-1431 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033955 No alias pectin methylesterase & original description: CDS=387-1493 0.06 OrthoFinder output from all 47 species
Azfi_s0648.g080900 No alias pectin methylesterase & original description: CDS=62-1303 0.02 OrthoFinder output from all 47 species
Ceric.11G007600.1 Ceric.11G007600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037000.1 Ceric.13G037000 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037800.1 Ceric.13G037800 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G062500.1 Ceric.14G062500 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.37G019000.1 Ceric.37G019000 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07534 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g11068 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16891 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20667 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g35272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07472 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14896 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15370 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014641001 QRT1 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
LOC_Os01g53990.1 LOC_Os01g53990 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_10267810g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_10428207g0020 No alias Probable pectinesterase 53 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_6149868g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_87592g0010 ATPE11, PE11 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Msp_g06323 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10586 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00669 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07458 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13329 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30255 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05557 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c12_24000V3.1 Pp3c12_24000 Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g05067 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59766 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950 No alias pectin methylesterase & original description: CDS=716-1846 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005602 No alias pectin methylesterase & original description: CDS=911-2185 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008023 No alias pectin methylesterase & original description: CDS=361-1506 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010557 No alias pectin methylesterase & original description: CDS=267-1394 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015880 No alias pectin methylesterase & original description: CDS=354-1487 0.03 OrthoFinder output from all 47 species
Sam_g02095 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11685 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37525 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Smo165098 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Solyc01g079180.4.1 Solyc01g079180 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g11007 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29378 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49578 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09242 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14064 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20547 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 105 387
No external refs found!