Description : endomembrane trafficking ATG6-stability regulator protein *(TRAF1) & original description: none
Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ceric.26G060700.1 | Ceric.26G060700 | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g40520.1 | LOC_Os12g40520 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434493g0010 | No alias | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g14880.1 | No alias | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08395 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g005430.4.1 | Solyc03g005430 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027387_P004 | Zm00001e027387 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032087_P004 | Zm00001e032087 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002083 | MATH/TRAF_dom | 38 | 128 |
| No external refs found! |
