Description : nucleocytoplasmic import karyopherin *(IMB1) & original description: none
Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00058p00157820 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00188470 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00252p00011130 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G08943 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G08947 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06365 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32943 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g02382 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04439 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g02724 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G004800.1 | Ceric.10G004800 | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.28G014800.1 | Ceric.28G014800 | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g01769 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09212 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030311001 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_36673 | No alias | IMB1 nucleocytoplasmic import karyopherin | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g28510.4 | LOC_Os05g28510 | IMB1 nucleocytoplasmic import karyopherin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g38110.1 | LOC_Os12g38110 | IMB1 nucleocytoplasmic import karyopherin | 0.03 | OrthoFinder output from all 47 species | |
| Len_g02901 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_34778g0010 | No alias | IMB1 nucleocytoplasmic import karyopherin | 0.05 | OrthoFinder output from all 47 species | |
| Mp6g11310.1 | No alias | IMB1 nucleocytoplasmic import karyopherin | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g30274 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40488 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g08379 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g08124 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g11141 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo185511 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g005010.4.1 | Solyc09g005010 | IMB1 nucleocytoplasmic import karyopherin | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002934_P001 | Zm00001e002934 | IMB1 nucleocytoplasmic import karyopherin | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0032040 | small-subunit processome | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
