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  5. Adi_g104042

Adi_g104042 (SPL11)


Aliases : SPL11

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g104042

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G27360 SPL11 squamosa promoter-like 11 0.02 OrthoFinder output from all 47 species
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.03 OrthoFinder output from all 47 species
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.03 OrthoFinder output from all 47 species
Ala_g14890 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08472 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10734 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22380 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75896 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre02.g104700 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Dcu_g07628 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14928 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020051001 SPL12 Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os06g49010.4 SPL2, LOC_Os06g49010 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g39890.1 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g41940.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g31438.1 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Len_g03838 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48733 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14940 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14903 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15680 SPL8 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524 SPL2 SBP-type transcription factor & original description: CDS=1-1641 0.03 OrthoFinder output from all 47 species
Sam_g14898 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08757 SPL4 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006686_P001 SPL8, Zm00001e006686 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e010067_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e010443_P001 SPL5, Zm00001e010443 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Zm00001e034537_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e035060_P002 SPL4, Zm00001e035060 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 236 310
No external refs found!