Adi_g105318 (GRP2B, ATGRP2B, ATCSP4)

Aliases : GRP2B, ATGRP2B, ATCSP4

Description : cold-responsive mRNA chaperone *(CSD) & original description: none

Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g105318

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01018771001	ATCSP2, GRP2, CSDP2, CSP2	External stimuli response.temperature.Csd...	0.03	OrthoFinder output from all 47 species
Solyc10g055250.1.1	ATCSP2, GRP2,...	RNA chaperone (CSP). mRNA chaperone (CSD)	0.03	OrthoFinder output from all 47 species
Zm00001e041725_P001	CSDP1, Zm00001e041725	RNA chaperone (CSP). mRNA chaperone (CSD)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	13	77
IPR001878	Znf_CCHC	166	180
IPR001878	Znf_CCHC	209	225

External Links

No external refs found!