Adi_g105593


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g105593

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00240430 OSB3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
AT2G35030 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036845 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057899 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.04 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086714 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30196 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28223 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04772.t1 CRR22, Aspi01Gene04772 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34952.t1 Aspi01Gene34952 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.02 OrthoFinder output from all 47 species
Azfi_s0731.g084096 No alias not classified & original description: CDS=1-3909 0.03 OrthoFinder output from all 47 species
Cba_g06922 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.02 OrthoFinder output from all 47 species
Ceric.11G086200.1 OTP84, Ceric.11G086200 not classified & original description: pacid=50595902... 0.03 OrthoFinder output from all 47 species
Ceric.12G028500.1 CRR22, Ceric.12G028500 not classified & original description: pacid=50602410... 0.03 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.03 OrthoFinder output from all 47 species
Ceric.26G043600.1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G013400.1 Ceric.27G013400 not classified & original description: pacid=50605328... 0.03 OrthoFinder output from all 47 species
Ceric.28G051100.1 Ceric.28G051100 not classified & original description: pacid=50570532... 0.02 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.03 OrthoFinder output from all 47 species
Ceric.31G002400.1 Ceric.31G002400 not classified & original description: pacid=50574432... 0.02 OrthoFinder output from all 47 species
Ceric.34G043400.1 Ceric.34G043400 not classified & original description: pacid=50623137... 0.03 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
GSVIVT01008922001 No alias Pentatricopeptide repeat-containing protein At4g08210... 0.01 OrthoFinder output from all 47 species
LOC_Os03g58100.1 OTP85, LOC_Os03g58100 RNA editing factor (OTP85) 0.02 OrthoFinder output from all 47 species
LOC_Os06g27790.1 REME1, LOC_Os06g27790 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Len_g19003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07374 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_107356g0010 CRR2 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_130735g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_14938g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_175688g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_68707g0010 No alias RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
MA_81436g0010 OTP84 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
MA_958908g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41402 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06160 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07991 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15408 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20608 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24057 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19959 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13363 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63652 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59836 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006149 No alias not classified & original description: CDS=1-2199 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013908 No alias not classified & original description: CDS=1-1767 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019397 No alias not classified & original description: CDS=1-2220 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022846 No alias not classified & original description: CDS=1-2226 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025088 No alias not classified & original description: CDS=1-2760 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026676 No alias not classified & original description: CDS=1-2475 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026691 No alias not classified & original description: CDS=1-2898 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s3367.g028731 No alias not classified & original description: CDS=2473-3459 0.03 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g02929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo30095 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Spa_g07311 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47078 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034903_P001 SLO1, Zm00001e034903 Pentatricopeptide repeat-containing protein At2g22410,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 96 118
IPR002885 Pentatricopeptide_repeat 223 270
IPR002885 Pentatricopeptide_repeat 125 168
IPR002885 Pentatricopeptide_repeat 20 66
No external refs found!