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  5. Adi_g105939

Adi_g105939 (PGP11)


Aliases : PGP11

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g105939

Target Alias Description ECC score Gene Family Method Actions
Aev_g39147 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18500 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g31851 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_01718 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os08g45030.1 PGP1, ABCB1,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_138894g0010 PGP11 subfamily ABCB transporter 0.08 OrthoFinder output from all 47 species
Mp1g26440.1 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Sam_g34273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo176522 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Spa_g39329 No alias subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 383 531
IPR003439 ABC_transporter-like_ATP-bd 1053 1203
IPR011527 ABC1_TM_dom 715 986
IPR011527 ABC1_TM_dom 45 314
No external refs found!