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  5. Adi_g106042

Adi_g106042 (CRT1b, AtCRT1b)


Aliases : CRT1b, AtCRT1b

Description : ER luminal lectin chaperone *(CRT) & original description: none


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g106042

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00024290 AtCRT1a, CRT1a,... Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
AT1G09210 CRT1b, AtCRT1b calreticulin 1b 0.05 OrthoFinder output from all 47 species
AT1G56340 AtCRT1a, CRT1a, CRT1 calreticulin 1a 0.04 OrthoFinder output from all 47 species
Ala_g09257 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10127 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02547 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17651 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20485 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G021500.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.02 OrthoFinder output from all 47 species
Cre01.g038400 AtCRT1a, CRT1a, CRT1 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Dcu_g18966 PIP5K9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ehy_g13538 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01031229001 CRT1b, AtCRT1b Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Gb_07615 AtCRT1a, CRT1a, CRT1 lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species
LOC_Os07g14270.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
Lfl_g12186 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31110 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g32686 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.05 OrthoFinder output from all 47 species
Smo144212 CRT1b, AtCRT1b Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Solyc01g100380.4.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 28 241
No external refs found!