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  5. Adi_g106562

Adi_g106562 (DRT111)


Aliases : DRT111

Description : pre-mRNA splicing factor *(SFPS/DRT111) & original description: none


Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g106562

Target Alias Description ECC score Gene Family Method Actions
Ceric.11G091900.1 DRT111, Ceric.11G091900 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
Len_g09639 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g10863 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
Msp_g06081 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e034397_P001 DRT111, Zm00001e034397 pre-mRNA splicing factor (SPF45/RBM17) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000467 G_patch_dom 249 288
IPR000504 RRM_dom 335 388
No external refs found!