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  5. Adi_g107400

Adi_g107400 (LRX2)


Aliases : LRX2

Description : not classified & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g107400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.02 OrthoFinder output from all 47 species
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
Adi_g016974 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04968 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18015 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33154.t1 Aspi01Gene33154 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046029 No alias LRR-domain extensin & original description: CDS=1-1872 0.03 OrthoFinder output from all 47 species
Ceric.32G025000.1 Ceric.32G025000 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08470.1 LOC_Os01g08470 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Len_g05367 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09607 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g078560.1.1 Solyc04g078560 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Solyc11g005150.3.1 LRX2, Solyc11g005150 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Solyc12g006980.2.1 Solyc12g006980 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 151 165
No external refs found!