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  5. Adi_g108713

Adi_g108713 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g108713

Target Alias Description ECC score Gene Family Method Actions
Adi_g107851 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Als_g21159 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dac_g31557 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16531 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
LOC_Os12g21700.1 ZFN1, LOC_Os12g21700 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004320 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g17138 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Spa_g31226 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 25 50
IPR000571 Znf_CCCH 71 94
IPR000571 Znf_CCCH 114 139
No external refs found!