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  5. Adi_g112212

Adi_g112212 (PAM68)


Aliases : PAM68

Description : protein involved in PS-II assembly *(PAM68) & original description: none


Gene families : OG0005725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g112212
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00088520 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
AT5G52780 No alias Protein of unknown function (DUF3464) 0.04 OrthoFinder output from all 47 species
Aob_g16015 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.07 OrthoFinder output from all 47 species
Aop_g00982 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g28925 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.08 OrthoFinder output from all 47 species
Ehy_g17711 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
MA_268175g0010 PAM68 PAM68 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Mp1g02230.1 PAM68 PAM68 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Ore_g07606 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.06 OrthoFinder output from all 47 species
Pir_g19463 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g12314 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g00344 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009124 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.07 OrthoFinder output from all 47 species
Spa_g17043 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Spa_g17044 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e039016_P001 PAM68, Zm00001e039016 PAM68 protein involved in PS-II assembly 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021855 PAM68-like 108 232
No external refs found!