1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g114072

Adi_g114072


Description : regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule dynamics & original description: none


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g114072

Target Alias Description ECC score Gene Family Method Actions
AT2G15530 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g07976 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g28197 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g10098 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Als_g19927 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g52753 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g02207 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g05319 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.03 OrthoFinder output from all 47 species
Aop_g04919 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04581.t1 Aspi01Gene04581 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12065.t1 Aspi01Gene12065 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053541 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0196.g057285 No alias not classified & original description: CDS=52-2475 0.04 OrthoFinder output from all 47 species
Ceric.22G051600.1 Ceric.22G051600 regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.02 OrthoFinder output from all 47 species
Dcu_g07140 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g43069 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g01694 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01025655001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01035519001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01036994001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Len_g29893 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g10164 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_10430240g0020 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
MA_112261g0010 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.02 OrthoFinder output from all 47 species
Mp1g11510.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Msp_g11041 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g19183 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g32504 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025113 No alias not classified & original description: CDS=1-927 0.02 OrthoFinder output from all 47 species
Sam_g06274 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g12356 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc01g107940.3.1 Solyc01g107940 E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g078680.4.1 Solyc04g078680 Probable E3 ubiquitin-protein ligase RHG1A... 0.02 OrthoFinder output from all 47 species
Solyc05g008840.2.1 Solyc05g008840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g007620.2.1 Solyc09g007620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g31415 No alias RING-H2-class CTL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e040092_P001 Zm00001e040092 E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 733 775
No external refs found!