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  5. Ehy_g19491

Ehy_g19491 (ATHDA15, HDA15)


Aliases : ATHDA15, HDA15

Description : class-II histone deacetylase & original description: none


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19491

Target Alias Description ECC score Gene Family Method Actions
AT3G18520 ATHDA15, HDA15 histone deacetylase 15 0.02 OrthoFinder output from all 47 species
Aob_g14691 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31554 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G066800.1 ATHDA15, HDA15,... class-II histone deacetylase & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os07g06980.1 ATHDA15, HDA15,... class-II histone deacetylase 0.03 OrthoFinder output from all 47 species
MA_10433146g0010 ATHDA5, HDA05, HDA5 class-II histone deacetylase 0.01 OrthoFinder output from all 47 species
MA_9030577g0010 ATHDA5, HDA05, HDA5 Histone deacetylase 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009048 ATHDA15, HDA15 class-II histone deacetylase & original description: CDS=178-1890 0.02 OrthoFinder output from all 47 species
Sam_g49320 No alias class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g119730.3.1 ATHDA15, HDA15,... class-II histone deacetylase 0.03 OrthoFinder output from all 47 species
Zm00001e032874_P003 ATHDA15, HDA15,... class-II histone deacetylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 221 509
No external refs found!