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  5. Ehy_g19663

Ehy_g19663


Description : not classified & original description: none


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19663

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00128640 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00129060 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00207230 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00091510 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g16127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20983.t1 Aspi01Gene20983 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34497.t1 Aspi01Gene34497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0182.g056424 No alias not classified & original description: CDS=1-1896 0.03 OrthoFinder output from all 47 species
Azfi_s0334.g065488 No alias not classified & original description: CDS=1-2136 0.02 OrthoFinder output from all 47 species
Azfi_s0334.g065497 No alias not classified & original description: CDS=1-1488 0.03 OrthoFinder output from all 47 species
Cba_g13201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G060100.1 Ceric.17G060100 not classified & original description: pacid=50617754... 0.02 OrthoFinder output from all 47 species
Ceric.1Z099600.1 Ceric.1Z099600 not classified & original description: pacid=50573463... 0.03 OrthoFinder output from all 47 species
Ceric.1Z099700.1 Ceric.1Z099700 not classified & original description: pacid=50573460... 0.03 OrthoFinder output from all 47 species
Ceric.1Z099800.1 Ceric.1Z099800 not classified & original description: pacid=50573466... 0.03 OrthoFinder output from all 47 species
Ceric.1Z159800.1 Ceric.1Z159800 not classified & original description: pacid=50567680... 0.04 OrthoFinder output from all 47 species
Ceric.1Z159900.1 Ceric.1Z159900 not classified & original description: pacid=50567683... 0.04 OrthoFinder output from all 47 species
Ceric.1Z166800.1 Ceric.1Z166800 not classified & original description: pacid=50632888... 0.03 OrthoFinder output from all 47 species
Ceric.1Z179700.1 Ceric.1Z179700 not classified & original description: pacid=50596893... 0.02 OrthoFinder output from all 47 species
Ceric.1Z228600.1 Ceric.1Z228600 not classified & original description: pacid=50606299... 0.03 OrthoFinder output from all 47 species
Ceric.1Z240500.1 Ceric.1Z240500 not classified & original description: pacid=50576892... 0.04 OrthoFinder output from all 47 species
Ceric.33G013700.1 Ceric.33G013700 not classified & original description: pacid=50607125... 0.03 OrthoFinder output from all 47 species
Dac_g45269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012688001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01012691001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g13190.1 LOC_Os02g13190 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g00910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g00930.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g01100.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g09104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0213.g025971 No alias not classified & original description: CDS=1-1506 0.03 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g080850.1.1 Solyc02g080850 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e014444_P001 Zm00001e014444 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024925_P001 Zm00001e024925 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 150 466
No external refs found!