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  5. Adi_g123881

Adi_g123881


Description : component *(eL42) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001983 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g123881
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00106300 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AMTR_s00077p00123980 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
AT3G23390 No alias Zinc-binding ribosomal protein family protein 0.02 OrthoFinder output from all 47 species
AT4G14320 No alias Zinc-binding ribosomal protein family protein 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000489.11 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre06.g310700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Dac_g46318 No alias component *(eL42) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01012052001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01032097001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_13148 No alias component RPL36a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Gb_34419 No alias component RPL36a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Lfl_g25065 No alias component *(eL42) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_99845g0010 No alias component RPL36a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp2g25770.1 No alias component RPL36a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Ore_g00450 No alias component *(eL42) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g60179 No alias component *(eL42) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c26_11220V3.1 Pp3c26_11220 Zinc-binding ribosomal protein family protein 0.01 OrthoFinder output from all 47 species
Pp3c7_20120V3.1 Pp3c7_20120 Zinc-binding ribosomal protein family protein 0.02 OrthoFinder output from all 47 species
Smo161986 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Spa_g55229 No alias component *(eL42) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e010489_P002 Zm00001e010489 component RPL36a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e035123_P001 Zm00001e035123 component RPL36a of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009555 pollen development IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 64 139
No external refs found!