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  5. Adi_g128238

Adi_g128238


Description : component *(uL11) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001473_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g128238

Target Alias Description ECC score Gene Family Method Actions
AT2G37190 No alias Ribosomal protein L11 family protein 0.03 OrthoFinder output from all 47 species
AT5G60670 No alias Ribosomal protein L11 family protein 0.03 OrthoFinder output from all 47 species
Ala_g38012 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g04839 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Als_g10325 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aop_g06826 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.27 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Cre12.g528750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01025189001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025683001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47140.1 LOC_Os02g47140 component RPL12 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os04g50990.1 LOC_Os04g50990 component RPL12 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Lfl_g36573 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c6_19290V3.1 Pp3c6_19290 Ribosomal protein L11 family protein 0.02 OrthoFinder output from all 47 species
Solyc06g075180.1.1 Solyc06g075180 component RPL12 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc11g065670.1.1 Solyc11g065670 component RPL12 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc11g069440.1.1 Solyc11g069440 component RPL12 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e008316_P001 Zm00001e008316 component RPL12 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e023297_P001 Zm00001e023297 component RPL12 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 13 67
IPR020783 Ribosomal_L11_C 74 143
No external refs found!