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  5. Ehy_g22951

Ehy_g22951 (ATCOL4, COL4)


Aliases : ATCOL4, COL4

Description : not classified & original description: none


Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g22951

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00262710 COL2, ATCOL2,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Aspi01Gene31427.t1 ATCOL4, COL4,... floral promoter *(CONSTANS) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009656 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: CDS=186-1232 0.03 OrthoFinder output from all 47 species
Dac_g09279 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11774 COL3, ATCOL3 floral promoter *(CONSTANS) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g15050.1 ATCOL5, COL5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g13470.1 ATCOL4, COL4 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Pir_g01588 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22028 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10567 COL1, ATCOL1 floral promoter *(CONSTANS) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002977 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Sam_g26598 No alias floral promoter *(CONSTANS) & original description: none 0.02 OrthoFinder output from all 47 species
Smo102902 COL2, ATCOL2 Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e013804_P001 ATCOL5, COL5,... Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e037873_P001 ATCOL4, COL4,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 159 200
No external refs found!