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  5. Ehy_g23878

Ehy_g23878 (SPL8)


Aliases : SPL8

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g23878
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Aev_g10292 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08975 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08296 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26421.t1 SPL8, Aspi01Gene26421 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G073300.1 SPL8, Ceric.11G073300 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G013900.1 SPL8, Ceric.23G013900 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cre16.g673250 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033519001 AtSPL9, SPL9 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Len_g21188 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35331 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Msp_g08289 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16004 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21455 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24530 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04942 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07869 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18194 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23336 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26273 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30310 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03154 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g018780.3.1 SPL8, Solyc10g018780 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Spa_g16422 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48285 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14278 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006686_P001 SPL8, Zm00001e006686 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 161 234
No external refs found!