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  5. Ehy_g24574

Ehy_g24574


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g24574
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00166950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
Adi_g034832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g073485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096243 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54955 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26965 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62402 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27421.t1 Aspi01Gene27421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34816.t1 Aspi01Gene34816 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000844 No alias not classified & original description: CDS=1-1557 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001620 No alias not classified & original description: CDS=1-4653 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008393 CRR22 not classified & original description: CDS=1-1839 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009227 No alias not classified & original description: CDS=1-1950 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011091 No alias not classified & original description: CDS=1-1857 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.01 OrthoFinder output from all 47 species
Azfi_s0043.g027128 No alias not classified & original description: CDS=146-1684 0.02 OrthoFinder output from all 47 species
Azfi_s0125.g048584 CRR22 not classified & original description: CDS=1-1611 0.01 OrthoFinder output from all 47 species
Azfi_s0126.g048644 No alias not classified & original description: CDS=1-2160 0.02 OrthoFinder output from all 47 species
Azfi_s0191.g056992 No alias not classified & original description: CDS=1-2262 0.02 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.01 OrthoFinder output from all 47 species
Azfi_s0896.g091565 No alias not classified & original description: CDS=1-2586 0.02 OrthoFinder output from all 47 species
Cba_g03281 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19795 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.05 OrthoFinder output from all 47 species
Ceric.20G079700.1 DOT4, Ceric.20G079700 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g42997 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07044 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Gb_36775 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g63560.1 LOC_Os03g63560 OTP70 plastidial RNA splicing factor 0.01 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.04 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g07790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26572 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07378 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21416 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43620 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61681 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009122 No alias not classified & original description: CDS=1-1917 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014482 No alias not classified & original description: CDS=1-1119 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021049 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2289 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.03 OrthoFinder output from all 47 species
Sam_g03383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Spa_g06501 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 336 359
IPR002885 Pentatricopeptide_repeat 165 189
IPR002885 Pentatricopeptide_repeat 541 569
IPR046848 E_motif 586 640
IPR002885 Pentatricopeptide_repeat 364 409
IPR002885 Pentatricopeptide_repeat 468 514
IPR002885 Pentatricopeptide_repeat 277 305
No external refs found!