1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g26837

Ehy_g26837 (ATARFA1B, ARFA1B)


Aliases : ATARFA1B, ARFA1B

Description : ARF-GTPase *(ARF1) & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g26837

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.03 OrthoFinder output from all 47 species
Adi_g009716 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024167 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g098666 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06715 ATARF1, ARF1,... ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08438 ARFA1E, ATARFA1E not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g38870 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02408 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31560 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.25G015600.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g12228 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27561 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40902 ATARFA1F, ARFA1F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02001 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028179001 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
LOC_Os06g02390.1 ATARFB1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os07g12200.1 ARF1A1C, LOC_Os07g12200 ARF-GTPase 0.02 OrthoFinder output from all 47 species
Len_g05534 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05175 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33269 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_9401071g0010 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Msp_g20906 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g20969 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40990 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02141 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43193 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020267 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: CDS=156-554 0.03 OrthoFinder output from all 47 species
Smo100907 ATARFB1C, ARFB1C Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Smo140818 ATARFA1B, ARFA1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc01g008000.3.1 ATARFA1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Spa_g16801 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29323 ATARFA1F, ARFA1F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49718 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023300_P004 ATARFB1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e025541_P003 ATARFA1F,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e036138_P002 ATARFB1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 75 247
No external refs found!