Ehy_g27336 (GATA1)

Aliases : GATA1

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g27336
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00242860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT2G18380	GATA20	GATA transcription factor 20	0.02	OrthoFinder output from all 47 species
AT3G06740	GATA15	GATA transcription factor 15	0.02	OrthoFinder output from all 47 species
Adi_g010897	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g066480	GATA23	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07273	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0061.g034964	GATA5	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Azfi_s1514.g103937	GATA20	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g07631	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015204001	GNC, GATA21	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
LOC_Os05g44400.1	GATA12, LOC_Os05g44400	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
MA_103421g0030	GATA5	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
MA_82238g0030	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Ore_g31511	GATA2	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g06393	GATA6	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14533	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g05839	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06282	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909	GATA9	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023073	GATA9	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g13371	No alias	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g13372	No alias	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e026601_P001	GATA20, Zm00001e026601	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Zm00001e032513_P001	Zm00001e032513	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0032324	molybdopterin cofactor biosynthetic process	IEP	HCCA
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051189	prosthetic group metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	131	164

External Links

No external refs found!

Ehy_g27336 (GATA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation