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  5. Ehy_g27342

Ehy_g27342


Description : component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex & original description: none


Gene families : OG0003195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g27342
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00212990 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane... 0.03 OrthoFinder output from all 47 species
AT1G09330 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
Als_g06527 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Aop_g00185 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Cba_g15043 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Dac_g01913 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
GSVIVT01028173001 No alias Vesicle trafficking.endomembrane... 0.02 OrthoFinder output from all 47 species
LOC_Os05g06700.1 LOC_Os05g06700 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.04 OrthoFinder output from all 47 species
MA_10435880g0020 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.04 OrthoFinder output from all 47 species
Pir_g31820 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Pp3c4_27310V3.1 Pp3c4_27310 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g57350 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Smo146417 No alias Vesicle trafficking.endomembrane... 0.02 OrthoFinder output from all 47 species
Solyc06g073270.4.1 Solyc06g073270 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.03 OrthoFinder output from all 47 species
Spa_g11568 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Spa_g11569 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008564 TVP23-like 46 186
No external refs found!