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  5. Ehy_g29388

Ehy_g29388 (TUB5)


Aliases : TUB5

Description : not classified & original description: none


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g29388

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00135960 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AT1G75780 TUB1 tubulin beta-1 chain 0.03 OrthoFinder output from all 47 species
Adi_g075879 TUB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18424 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Als_g39455 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20652 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35906.t1 TUB2, Aspi01Gene35906 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Azfi_s0241.g059758 TUB6 not classified & original description: CDS=105-1223 0.03 OrthoFinder output from all 47 species
Azfi_s0678.g081838 TUB6 not classified & original description: CDS=1-1224 0.03 OrthoFinder output from all 47 species
Dcu_g07559 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
GSVIVT01037405001 TUB2 Tubulin beta-4 chain OS=Eleusine indica 0.02 OrthoFinder output from all 47 species
Gb_33450 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Len_g08236 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Len_g29601 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Len_g43850 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Lfl_g07733 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
MA_55439g0010 TUB2 Tubulin beta-1 chain OS=Solanum tuberosum... 0.02 OrthoFinder output from all 47 species
MA_72744g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
MA_8465279g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 126.0) 0.03 OrthoFinder output from all 47 species
MA_9451675g0010 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Msp_g34530 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Pir_g19218 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000584 TUB2 not classified & original description: CDS=76-996 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026924 TUB1 not classified & original description: CDS=124-1059 0.02 OrthoFinder output from all 47 species
Sam_g16934 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo231661 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Solyc03g118760.4.1 TUB6, Solyc03g118760 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Spa_g07504 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29272 TUB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 1 103
No external refs found!