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  5. Ehy_g30049

Ehy_g30049


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g30049
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g004438 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g024494 ATMYR1, MYR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076600 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g18499 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g09241 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12916 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22498 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g09042 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G047900.1 Ceric.11G047900 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g02748 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g03760.1 LOC_Os03g03760 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g51130.1 LOC_Os04g51130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41240.1 LOC_Os05g41240 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g13527 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g01961 PHR1, AtPHR1 transcription factor *(PHR1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24104 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g09161 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66199 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09624 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17565 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g05575 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g22183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39281 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc04g079600.3.1 KAN4, ATS, Solyc04g079600 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc12g098370.2.1 Solyc12g098370 G2-like GARP transcription factor. transcription factor (PHR1) 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g16091 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g30427 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40903 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 214 264
IPR025756 Myb_CC_LHEQLE 301 346
No external refs found!