1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g30696

Ehy_g30696 (KNAT3)


Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g30696
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00165180 KNAT6, KNAT6L,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT1G62360 BUM1, SHL, STM,... KNOX/ELK homeobox transcription factor 0.04 OrthoFinder output from all 47 species
AT4G08150 BP, BP1, KNAT1 KNOTTED-like from Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G11060 KNAT4 KNOTTED1-like homeobox gene 4 0.02 OrthoFinder output from all 47 species
AT5G25220 KNAT3 KNOTTED1-like homeobox gene 3 0.05 OrthoFinder output from all 47 species
Aev_g21619 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31921 KNAT4 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08926 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22220 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29252 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G020400.1 KNAT3, Ceric.13G020400 KNOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Gb_00572 BP, BP1, KNAT1 transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Gb_00573 BUM1, SHL, STM,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
LOC_Os01g19694.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g51690.2 BP, BP1, KNAT1,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
LOC_Os03g56140.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
LOC_Os07g03770.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Lfl_g06541 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428446g0010 BP, BP1, KNAT1 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Ore_g35975 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026749 KNAT3 not classified & original description: CDS=1-780 0.02 OrthoFinder output from all 47 species
Sam_g23106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40671 No alias KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47381 No alias KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g005090.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Spa_g34613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000173_P003 KNAT7, IXR11,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e005547_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e011538_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Zm00001e017489_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Zm00001e027562_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Zm00001e029453_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Zm00001e037459_P002 KNAT3, Zm00001e037459 transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e039044_P001 KNAT7, IXR11,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005540 KNOX1 119 160
IPR008422 Homeobox_KN_domain 335 374
IPR005541 KNOX2 180 229
No external refs found!