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  5. Ehy_g31882

Ehy_g31882


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g31882
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00250010 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Als_g25389 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22999 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17120.t1 Aspi01Gene17120 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0109.g045300 No alias histone H3 variant *(CENH3) & original description: CDS=340-828 0.02 OrthoFinder output from all 47 species
Ehy_g31894 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.02 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11607 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
MA_90399g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Mp7g18030.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Msp_g41988 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06291 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10065 HTR12, CENH3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21341 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04217 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19108 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005529 No alias not classified & original description: CDS=1-426 0.02 OrthoFinder output from all 47 species
Sam_g06112 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06113 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g074580.1.1 Solyc04g074580 histone (H3) 0.02 OrthoFinder output from all 47 species
Tin_g22408 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25835 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022688_P001 Zm00001e022688 histone (H3) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!