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  5. Nbi_g00285

Nbi_g00285


Description : not classified & original description: none


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00285
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT2G40110 No alias Yippee family putative zinc-binding protein 0.03 OrthoFinder output from all 47 species
Als_g23910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019631001 No alias Protein yippee-like At4g27745 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032842001 No alias Protein yippee-like OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
LOC_Os11g35020.2 LOC_Os11g35020 Protein yippee-like At4g27745 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_137111g0010 No alias Protein yippee-like OS=Solanum tuberosum... 0.04 OrthoFinder output from all 47 species
Mp4g11690.1 No alias Protein yippee-like At5g53940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g076750.2.1 Solyc10g076750 Protein yippee-like OS=Solanum tuberosum... 0.02 OrthoFinder output from all 47 species
Solyc12g013920.2.1 Solyc12g013920 Protein yippee-like At5g53940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 11 103
No external refs found!