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  5. Nbi_g00841

Nbi_g00841 (GAMMA-TIP, GAMMA-TIP1, TIP1;1)


Aliases : GAMMA-TIP, GAMMA-TIP1, TIP1;1

Description : tonoplast intrinsic protein *(TIP) & original description: none


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00841

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00145020 TIP4;1,... Solute transport.channels.MIP family.tonoplast intrinsic... 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00023270 PIP2D, PIP2;5,... Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
AT3G53420 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein 2A 0.03 OrthoFinder output from all 47 species
Adi_g083366 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083367 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083369 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086682 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Aev_g02921 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09331 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09418 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10051 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38056 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51426 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02440 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06015 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g20060 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0587.g078546 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G085200.1 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02004 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018189001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 OrthoFinder output from all 47 species
GSVIVT01032861001 PIP1;5, PIP1D Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
LOC_Os06g22960.1 ATTIP2;1,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g26690.1 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
LOC_Os10g34000.1 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Lfl_g19852 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426941g0010 GAMMA-TIP,... Aquaporin TIP2-3 OS=Zea mays (sp|q84rl6|tip23_maize : 129.0) 0.02 OrthoFinder output from all 47 species
MA_112061g0010 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
MA_1600002g0010 ATTIP2;1,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_17793g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
MA_8493350g0010 ATTIP2;1,... Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Mp1g04190.1 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Mp1g28620.1 TMP-C, PIP1;4, PIP1E plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Mp4g03020.1 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Mp4g17210.1 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Msp_g29818 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47455 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.05 OrthoFinder output from all 47 species
Ore_g26721 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ore_g34411 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14577 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Pir_g54571 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g28106 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g094690.4.1 PIP1;5, PIP1D,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Spa_g31257 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Spa_g49548 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51407 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Tin_g14367 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007271_P004 TMP-C, PIP1;4,... Probable aquaporin PIP1-2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e015168_P001 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Zm00001e015330_P001 DELTA-TIP3,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Zm00001e023164_P002 DELTA-TIP3,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Zm00001e027152_P001 TIP4;1, Zm00001e027152 tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Zm00001e041529_P001 DELTA-TIP2,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 18 235
No external refs found!