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  5. Nbi_g00864

Nbi_g00864


Description : ubiquitin adaptor protein *(TOL) & original description: none


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00864

Target Alias Description ECC score Gene Family Method Actions
Ala_g03896 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03493 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0162.g054173 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0172.g055713 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.02G086300.1 Ceric.02G086300 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61030.1 LOC_Os01g61030 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os02g17350.2 LOC_Os02g17350 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os02g46962.1 LOC_Os02g46962 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Mp5g05840.1 No alias TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Msp_g07938 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45551 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01965 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007586 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Smo67275 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
Spa_g28672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011075_P001 Zm00001e011075 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Zm00001e015516_P001 Zm00001e015516 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR004152 GAT_dom 235 307
IPR002014 VHS_dom 46 181
No external refs found!