Nbi_g01055


Description : not classified & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01055

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263580 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00263620 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00036270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ala_g12004 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13834 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11277.t1 Aspi01Gene11277 E3 ubiquitin ligase *(AIRP1) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene14056.t1 RHB1A, Aspi01Gene14056 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00917 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z042300.1 Ceric.1Z042300 E3 ubiquitin ligase *(AIRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Len_g02188 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_18827g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18827g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_279737g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021903 No alias not classified & original description: CDS=1921-2982 0.05 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g068680.1.1 Solyc02g068680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g082940.3.1 Solyc04g082940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g014370.1.1 Solyc08g014370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 3 46
IPR004146 DC1 110 157
IPR004146 DC1 56 101
IPR004146 DC1 167 211
IPR001841 Znf_RING 298 340
No external refs found!