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  5. Nbi_g01176

Nbi_g01176 (HSP60, HSP60-3B)


Aliases : HSP60, HSP60-3B

Description : chaperone *(Hsp60) & original description: none


Gene families : OG0001609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00241820 HSP60, HSP60-3B,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT2G33210 HSP60-2 heat shock protein 60-2 0.06 OrthoFinder output from all 47 species
Adi_g054886 HSP60-2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02162 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19188 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01781 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30058 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025479 HSP60, HSP60-3B chaperone *(Hsp60) & original description: CDS=79-1794 0.04 OrthoFinder output from all 47 species
Cba_g03933 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G020600.1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g11411 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016859001 HSP60-3A External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
GSVIVT01029025001 HSP60, HSP60-3B External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Gb_35390 HSP60, HSP60-3B chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Gb_37654 HSP60, HSP60-3B chaperone (Hsp60) 0.05 OrthoFinder output from all 47 species
LOC_Os05g46290.1 HSP60-3A, LOC_Os05g46290 chaperone (Hsp60) 0.05 OrthoFinder output from all 47 species
Len_g12398 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
MA_8569886g0010 HSP60, HSP60-3B Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Mp6g16880.1 HSP60, HSP60-3B chaperone (Hsp60) 0.02 OrthoFinder output from all 47 species
Msp_g11889 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06294 No alias chaperone *(Hsp60) & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g06295 No alias chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g10342 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10343 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g121640.3.1 HSP60-3A, Solyc03g121640 chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Solyc05g053470.3.1 HSP60, HSP60-3B,... chaperone (Hsp60) 0.05 OrthoFinder output from all 47 species
Spa_g08282 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18561 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06599 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004641_P001 HSP60, HSP60-3B,... chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Zm00001e032273_P004 HSP60-3A, Zm00001e032273 chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 49 550
No external refs found!