1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g02075

Nbi_g02075


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02075

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00095620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Ala_g13064 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g00792 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g32108 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g39874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01648 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g01763 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19753.t1 Aspi01Gene19753 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32964.t1 Aspi01Gene32964 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33756.t1 Aspi01Gene33756 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02950 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g38693 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11610 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g36756 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09161 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g17264 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12454 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016001 No alias not classified & original description: CDS=379-1050 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 53 103
IPR025756 Myb_CC_LHEQLE 137 182
No external refs found!