Nbi_g02098

Description : component *(CHL-B) of light-independent protochlorophyllide oxidoreductase complex & original description: none

Gene families : OG0008656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008656_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g02098
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
Aev_g23246	No alias	component *(CHL-B) of light-independent...	0.17	OrthoFinder output from all 47 species
Ala_g08414	No alias	component *(CHL-B) of light-independent...	0.09	OrthoFinder output from all 47 species
Als_g12623	No alias	component *(CHL-B) of light-independent...	0.17	OrthoFinder output from all 47 species
Aob_g13080	No alias	component *(CHL-B) of light-independent...	0.06	OrthoFinder output from all 47 species
Cba_g01188	No alias	component *(CHL-B) of light-independent...	0.1	OrthoFinder output from all 47 species
Ceric.01G057200.1	Ceric.01G057200	component *(CHL-B) of light-independent...	0.12	OrthoFinder output from all 47 species
Ceric.01G104800.1	Ceric.01G104800	component *(CHL-B) of light-independent...	0.03	OrthoFinder output from all 47 species
Ceric.03G100100.1	Ceric.03G100100	component *(CHL-B) of light-independent...	0.07	OrthoFinder output from all 47 species
Ceric.26G042500.1	Ceric.26G042500	component *(CHL-B) of light-independent...	0.12	OrthoFinder output from all 47 species
Dde_g08116	No alias	component *(CHL-B) of light-independent...	0.07	OrthoFinder output from all 47 species
Gb_14516	No alias	Light-independent protochlorophyllide reductase subunit...	0.03	OrthoFinder output from all 47 species
Gb_27606	No alias	component CHL-B of light-independent protochlorophyllide...	0.05	OrthoFinder output from all 47 species
Lfl_g36498	No alias	component *(CHL-B) of light-independent...	0.19	OrthoFinder output from all 47 species
Pir_g06122	No alias	component *(CHL-B) of light-independent...	0.08	OrthoFinder output from all 47 species
Sam_g03855	No alias	component *(CHL-B) of light-independent...	0.05	OrthoFinder output from all 47 species
Smo137837	No alias	Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll...	0.06	OrthoFinder output from all 47 species
Tin_g19518	No alias	component *(CHL-B) of light-independent...	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
BP	GO:0015994	chlorophyll metabolic process	None	Extended
BP	GO:0015995	chlorophyll biosynthetic process	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000510	Nase/OxRdtase_comp1	12	431
IPR013580	LI-POR_suB-like_C	465	509

External Links

No external refs found!

Nbi_g02098

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation